miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: Browse :: Contigs




EST name EST sequence
gi|145866457|gb|ES372545.1|ES372545 GAAACTCTGCGCTTCTTCTGCTATGAGGGCTATGAACTCATTGGAGAGGTCATTATCACATGTGTTCCTGGACACCCATC
TCAGTGGAACAGCCCGCCACCCTTTTGCAAAGTGGCATACGAGGAGCTTTTGGACGACCACAAGTCAGAAGTGTCCCAGT
CTTTCGAGCCGTCCCGTCAGATCCTGAGTGAAAACATCGCCTTGGCGATTATTCTGCCCATCATTCTGGTCATCCTCCTG
ATTGGAGGCATTTACATGTACTATACAAACATTTGCAGACTAGAATGGAAGCCTCTCTTCTGGAAATCTCTCTCTCACAC
ACACTCCTACAGTCCCATTACAGTCGAGTCGGATTTCAACAACCCTTTTTACGAAGCGGGAGACACGCGGGAGTACGAAG
TTTCCATTTGAAGAAGAGCGTTTTTGGGTGAGAAATAAAACCACAGAAGCATTAAATTCTTGAAGAAGACAAAGTCTTTT
TGTATGAAAAGGCCTCACTCCCCCTATAATACTTGCTTTTTTTATTTTTGTGTTTTGTTTTGTTTTTGTTTGTTTTTTTT
ACCATCGCAGTTTGTAACTACTTTATATTGATTGTGTTTCATTTGCCAAAAGTGAGACCCTGGTAATAGTGTAACTTTCT
GTGTTATTAGGACTGGTGCCTTATGAGGGATAAGAAATTGAATTTTAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA




Most similar to sp|Q6AX42|SEZ6_XENLA

>BLASTX 2.2.20 [Feb-08-2009]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.
>sp|Q6AX42|SEZ6_XENLA Seizure protein 6 homolog OS=Xenopus laevis
            GN=sez6 PE=2 SV=1
          Length = 900

 Score =  166 bits (419), Expect = 2e-40
 Identities = 83/136 (61%), Positives = 92/136 (67%)
 Frame = +1

Query: 1    ETLRFFCYEGYELIGEVIITCVPGHPSQWNSPPPFCKVAYEELLDDHKSEVSQSFEPSRQ 180
            E LRFFCYEG+ELIGEV ITC PGHPSQW S PP CKVAYEELLDD K EV+Q+ +PS Q
Sbjct: 768  EALRFFCYEGFELIGEVTITCAPGHPSQWTSQPPLCKVAYEELLDDRKLEVTQTTDPSHQ 827

Query: 181  ILSENXXXXXXXXXXXXXXXXXXXYMYYTNICRLEWKPLFWKSLSHTHSYSPITVESDFN 360
            +   N                   Y+YYT   + + K LF  S   +HSYSPITVESDFN
Sbjct: 828  MEGGNIALAIFLPIILVILLIGGIYIYYT---KFQGKSLFGFSFPASHSYSPITVESDFN 884

Query: 361  NPFYEAGDTREYEVSI 408
            NP YEAGDTREYEVSI
Sbjct: 885  NPLYEAGDTREYEVSI 900